MRI and PET

The following list of converters can help you convert MRI and PET data into BIDS compliant datasets.

MRI and PET converters

Name	Expected input	Language	Distribution	Updated
bidsify	DICOM PAR/REC	Python
bidskit	DICOM	Python
BMAT	DICOM	Python
Data2Bids	not DICOM	Python
Dcm2Bids	DICOM	Python
HeuDiConv	DICOM	Python
OpenfMRI2BIDS	openfMRI datasets	???
ReproIn	DICOM	Python
XNAT2BIDS	DICOM	shell
Horos (Osirix) export plugin	???	objective C
BIDScoin	DICOM PAR/REC physiological PET Nifti	Python
BIDSme	DICOM Nifti Brain Vision	Python
BrkRaw	Bruker MRI scanner data	Python
Clinica	ADNI AIBL NIFD OASIS OASIS-3	Python
niix2bids	Nifti converted from DICOM using dcm2niix	Python
dac2bids	DICOM	Python
Autobids	DICOM	???
PET2BIDS	DICOM ECAT	MATLAB Python
Explore ASL	DICOM Nifti	MATLAB
SAMRI	Bruker ParaVision NIfTI	Python shell
BIDSconvertR	DICOM	R
ezBIDS	DICOM NIfTI/JSON events (tsv, csv, txt, out, xlsx)	Vue TypeScript Javascript Python shell
mercure-dcm2bids	DICOM	Python